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     1  ~ 2014 sep 26clustalwClustalW2 < Multiple Sequence Alignment < EMBL-EBIClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins. It attempts to calculate the best match for the selected sequences, ... ‎Clustal Omega - ‎Help & Documentation - ‎Web Services
     1  ~ 2014 sep 21clustal w2ClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins. It attempts to calculate the best match for the selected sequences, 
     1  +3 2014 sep 17fastaSSEARCH FASTA - European Bioinformatics InstituteThis tool provides sequence similarity searching against protein databases using the FASTA suite of programs. FASTA provides a heuristic search with a protein ... ‎Nucleotide - ‎Protein Databases - ‎Whole Genome Shotgun - ‎Proteomes
     1  ~ 2014 sep 14genewiseGeneWise < Pairwise Sequence Alignment < EMBL-EBIGeneWise compares a protein sequence to a genomic DNA sequence, allowing for introns and frameshifting errors. STEP 1 - Enter your sequences.
     1  ~ 2014 sep 11procheckerPROCHECK home page - European Bioinformatics InstitutePROCHECK checks the stereochemical quality of a protein structure, producing a number of PostScript plots analysing its overall and ...
     1  ~ 2014 sep 11eccodeEC CodeEntry Number, Enzyme Name, EC Code , PDB Code, CATH Code. M0255, alcohol dehydrogenase, 1.1.1.1 · 1mg5 · 3.40.50.720 · 3.40.50.720 · M0256, alcohol ...
     1  +1 2014 sep 06arp3Actin-related protein 3 ( Arp3 ) (IPR015623) < InterPro < EMBL-EBIActin-related protein 3 ( Arp3 ) shares about 35-40% amino acid identity with conventional actin [PMID: 7593166]. Arp3 is only found in the cell as a member of a ...
     1  ~ 2014 sep 05interproInterPro - European Bioinformatics InstituteInterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites. We combine protein signatures ... ‎InterProScan - ‎Download - ‎About InterPro - ‎FAQs
     1  ~ 2014 aug 15multiple sequence alignmentBioinformatics Tools for Multiple Sequence Alignment < EMBL-EBIMultiple Sequence Alignment (MSA) is generally the alignment of three or more biological sequences (protein or nucleic acid) of similar length. From the output ... ‎ClustalW2 - ‎Clustal Omega - ‎Muscle - ‎T-Coffee
     1  ~ 2014 aug 12gene expression atlasExpression Atlas < EMBL-EBI - European Bioinformatics InstituteThe Expression Atlas provides information on gene expression patterns under different biological conditions. Gene expression data is re-analysed in-house to ... ‎Baseline Experiments - ‎Ensmusg00000021789 - ‎ASPM - ‎React_1619
     1  +1 2014 aug 08bug tracing bottom up[BMB-61] Bottom - up clean-up of everything - JIRA Bug TrackerJon Ison added a comment - 15-Jul-13 13:32 Not a near term priority but added to a list for future refactoring: ...
     2  ~ 2014 oct 121hssPDBsum entry: 1hss - European Bioinformatics InstituteThe crystal structure of 0.19 alpha-amylase inhibitor (0.19 AI) from wheat kernel was determined by the multiple-isomorphous replacement method coupled with ...
     2  ~ 2014 oct 02lvivd repeat proteinProteins matched: LVIVD (IPR013211) < InterPro < EMBL-EBIResults 1 - 20 of 487 ... This repeat is found in the following proteins : Showing 1 to ...
     2  ~ 2014 sep 27edg dortLysophosphatidic acid receptor EDG - 4 (IPR004066) < InterPro G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and ...
     2  ~ 2014 sep 27embossEMBOSS programs < EMBL-EBI - European Bioinformatics InstituteEMBOSS Programs. Feedback. Share. Tools > EMBOSS Programs. Selected EMBOSS tools for sequence analysis. Pairwise Sequence Alignment. Needle More ... ‎EMBOSS Needle - ‎EMBOSS Transeq - ‎EMBOSS Water - ‎Nucleotide
     2  ~ 2014 sep 253maoPDBsum entry: 3mao - European Bioinformatics Institute3mao . Jmol. Contents. Protein chain. 105 a.a. *. Ligands. MLI ×2. Metals. _FE. _NA ×2. Waters ×143. * Residue conservation analysis. PDB id: 3mao  ...
     2  ~ 2014 sep 25emdbThe Electron Microscopy Data Bank - European Bioinformatics InstituteThe Electron Microscopy Data Bank ( EMDB ) is a public repository for electron microscopy density maps of macromolecular complexes and subcellular structures ...
     2  +6 2014 sep 24mac ieMACiE Home Page - European Bioinformatics InstituteMACiE , which stands for Mechanism, Annotation and Classification in Enzymes, is a collaborative project between the Thornton Group at the ...
     2  ~ 2014 sep 20muscleMUSCLE < Multiple Sequence Alignment < EMBL-EBIMUSCLE stands for MUltiple Sequence Comparison by Log-Expectation. MUSCLE is claimed to achieve both better average accuracy and better speed than ...
     2  -1 2014 sep 19muscl webMUSCLE stands for MUltiple Sequence Comparison by Log-Expectation. ... This website uses cookies to store a small amount of information on your computer, ...
     2  +2 2014 sep 17sulfonamide hydrochloride salt structureN-(4-aminobutyl)-5-chloronaphthalene-2- sulfonamide hydrochloride Definition, A hydrochloride salt prepared from equimolar amounts of ... Supplier Information. See structure as: Image, Applet. Save molfile ...
     2  +1 2014 sep 14unichemUniChem - European Bioinformatics InstituteUniChem efficiently produces cross-references between chemical structure identifiers from different databases (more background). Use the form below to search ...
     2  ~ 2014 sep 13leave estimate unsetJIRA - Time Tracking - JIRA Bug TrackerRemaining Estimate - the amount of time anticipated to resolve the issue after ... Leave Estimate Unset - does not specify any time estimates for the issue.
     2  ~ 2014 sep 12the sequence in translationBioinformatics Tools for Sequence Translation < EMBL-EBISequence Translation is used to translate nucleic acid sequence to corresponding peptide sequences. Back-translation is used to predict the possible nucleic ... ‎EMBOSS Transeq - ‎EMBOSS Sixpack - ‎EMBOSS Backtranseq
     2  ~ 2014 sep 11sequence alignment
     2  ~ 2014 sep 114dlePDBsum entry: 4dleName: Transferase/DNA. Title: Ternary structure of the large fragment of taq DNA polymeras fluoroproline variant. Structure: DNA polymerase i, thermostable.
     2  +2 2014 sep 03havecker train the trainerPlant Bioinformatics | Trainingwith plant data. No previous training in bioinformatics is required. ... Lisa Mullan; Ericka Havecker (Department of Plant Sciences, University of Cambridge ) ...
     2  ~ 2014 aug 30translate dna to proteinEMBOSS Sixpack displays DNA sequences with 6-frame translation and ORFs. ... EMBOSS Backtranseq back- translates protein sequences to nucleotide  ...
     2  ~ 2014 aug 30converte dna to proteinSequence Translation is used to translate nucleic acid sequence to ... EMBOSS Sixpack displays DNA sequences with 6-frame translation and ORFs. ... EMBOSS Backtranseq back-translates protein sequences to nucleotide sequences.
     2  ~ 2014 aug 28dna to protein translationEMBOSS Sixpack displays DNA sequences with 6-frame translation and ORFs. ... EMBOSS Backtranseq back-translates protein sequences to nucleotide ...
     2  ~ 2014 aug 28domains go fatFocal adhesion kinase, targeting ( FAT ) domain (IPR005189 Domain organisations (30). Pathways & ... Focal adhesion kinase, targeting ( FAT ) domain (IPR005189) ... GO :0004713 protein tyrosine kinase activity
     2  ~ 2014 aug 26protein to dna convertorEMBOSS Sixpack displays DNA sequences with 6-frame translation and ORFs. ... EMBOSS Backtranseq back-translates protein sequences to nucleotide ... ‎EMBOSS Transeq - ‎EMBOSS Sixpack - ‎EMBOSS Backtranseq
     2  ~ 2014 aug 22embo international phdEMBL International PhD Programme < Research < EMBL-EBIEstablished in 1983, the EMBL International PhD Programme provides students with the best starting platform for a successful career in science. Characterised ...
     2  +4 2014 aug 21mhc class iMore than one Class of MHCThere are two major classes of MHC molecules, both of which consist of an a and a b chain, but from different sources. MHC class I molecules (MHC I) consist of ...
     2  ~ 2014 aug 20tools converting fastaReadseq < Sequence Format Conversion < EMBL-EBITools > Sequence Format Conversion > Readseq ... a selection of common biological sequence formats, including EMBL, GenBank and fasta sequence formats.
     2  ~ 2014 aug 17european molecular biology laboratoryEMBL European Bioinformatics InstituteThe one-stop portal to all your bioinformatics needs: the European Bioinformatics Institute ( EMBL -EBI) is a centre for research and services in bioinformatics.
     2  ~ 2014 aug 04buy ena numbersENA Browser REST URLs | The European Nucleotide Archivehttp://www.ebi.ac.uk/ ena /data/view/<identifier>. For example, the following URL returns the sequence entry with accession number A00145 in HTML format: ...
     2  +11 2014 jul 26kegg s typhimuriumBacterial invasion of epithelial cells - Salmonella typhimurium (strain occursIn, Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720), Taxonomy. isDerivedFrom, Bacterial invasion of epithelial cells, KEGG Pathway ...
     2  +2 2014 jul 25jira text formatierungText Formatting Notation Help - JIRA Bug TrackerText Effects. Text effects are used to change the formatting of words and sentences. .... differently. CSS class names in the format "embeddedObject-ID" are used.
     2  ~ 2014 jul 22dna sequence alignment
     3  -1 2014 sep 27ncbi blast 欠点NCBI BLAST < Sequence Similarity Searching < EMBL-EBIBLAST stands for Basic Local Alignment Search Tool.The emphasis of this tool is to find regions of sequence similarity, which will yield functional and ...
     3  -1 2014 sep 27operation malachite wikipediamalachite green cation (CHEBI:44107)ChEBI Name, malachite green cation. ChEBI ID ... Definition , An iminium ion obtained by dimethylation of the imino group of ... Waiting for wikipedia content .... Cookies used for the operation of the site have already been set.
     3  -1 2014 sep 24cttvWhere do you start when developing a new medicine? < Press The new Centre for Therapeutic Target Validation will use genomics and big data to drive drug discovery.
     3  ~ 2014 sep 23gene ontologyQuickGO - European Bioinformatics InstituteGO slims are lists of GO terms that have been selected from the full set of terms available from the Gene Ontology project. GO slims can be used to generate a ...
     3  -1 2014 sep 17ca 4l6sPDB headerHEADER TRANSFERASE/TRANSFERASE INHIBITOR 12-JUN-13 4L6S ..... 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 747 N - CA - C ANGL.
     3  -1 2014 sep 16emblEuropean Nucleotide Archive < EMBL -EBIProvides a comprehensive record of the world's nucleotide sequencing information. Contains databases of next generation sequencing reads, including  ...
     3  ~ 2014 sep 15nbrf njHelp: ClustalW2 - European Bioinformatics InstituteSequences can be be in GCG, FASTA, EMBL, PIR, NBRF or UniProtKB/Swiss- Prot format. Partially ... NJ , Neighbour-joining (Saitou and Nei 1987), NJ . UPGMA  ...
     3  ~ 2014 sep 14uniprotUniprot < EMBL-EBI - European Bioinformatics InstituteThe mission of UniProt is to provide the scientific community with a comprehensive, high quality and freely accessible resource of protein sequence and ...
     3  +2 2014 sep 123r3r PDBsum entry: 3r3r - European Bioinformatics InstituteName: Transferase. Title: Structure of the yrda ferripyochelin binding protein from sa enterica. Structure: Ferripyochelin binding protein. Chain: a. Engineered: ...
     3  ~ 2014 sep 063ekkPDBeView - PDB entry 3ekk - European Bioinformatics Institute3ekk Summary. pdbe.org/ 3ekk · wwPDB · EMDataBank · Feedback · Share ... Structure factors · SIFTS · PISA. Collapse Links. Useful links for 3ekk . PDB@ RCSB ...
     3  ~ 2014 sep 06jira bold in commentsNotation, Comment . *strong*, Makes text strong. _emphasis_, Makes text emphasis.. ??citation?? Makes text in citation . -deleted-, Makes text as deleted .
     3  +4 2014 sep 05ftp search ukUploading data files | The European Nucleotide ArchiveRead data files can be uploaded to your private drop using FTP or Aspera protocols:
     3  -1 2014 aug 27protein to dna
     3  +5 2014 aug 19courses in bioinformaticsCourses held at EMBL-EBI - European Bioinformatics InstituteWelcome to Courses at EMBL-EBI. We hold courses and workshops in our purpose-built IT training suite. These range from hands-on courses aimed at ...
     3  ~ 2014 aug 18growth hormone receptorGrowth hormone receptorGrowth hormone receptor . By Jennifer McDowall. To view GH receptor structure. How tall you grow depends upon many different gene products, but one in ...
     3  +1 2014 aug 15bulk news serviceFirst bulk CRAM submission to ENA < Service news < News < About The first large-scale read data set in the CRAM compressed format has been submitted, undergone processing and been made public at ENA.
     3  +2 2014 aug 15aile siteleri icin domainDNA-binding HTH domain , TetR-type, conserved site (IPR023772 The TetR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 60 residues present in the TetR family of prokaryotic transcription ...
     3  +98 2014 aug 13free vector blastsNCBI BLAST Vectors Basic Local Alignment Search Tool for
     3  +1 2014 aug 09practical biology courseEMBO Practical Course on Computational Structural Biology - from This course aims to teach computational aspects of protein structure determination, validation and analysis. It will cover the background of different structural ...
     3  +2 2014 jul 21micro array databaseArrayExpress < EMBL-EBI - European Bioinformatics InstituteDatabase of gene expression and other microarray data at the European Bioinformatics Institute (EBI), located at the Wellcome Trust Foundation in Cambridge, ... ‎ArrayExpress - Experiments - ‎Submit - ‎Searching - ‎Arrays
     3  ~ 2014 jul 19sequence patent searchPatent Protein Sequences < Patent Data Resources < EMBL-EBIThe patent protein databases cover sequences of EPO proteins, JPO proteins, ... To search sequences against the patent proteins, the user can use similarity ...
     4  ~ 2014 oct 03protein data bankPDBe Protein Data Bank in Europe - European Bioinformatics InstituteEMBL EBI PDBe - Protein Data Bank Europe is a European resource for PDB protein structure deposition and PDB structure annotation to the wwPDB .
     4  +1 2014 sep 22cyp450 enzymesCytochrome P450Molecule of the Month: Cytochrome P450 · ExPASy Protein ... Cytochrome P450 enzymes are responsible for most phase I reactions. · Phase II metabolism takes  ...
     4  -1 2014 sep 183azePDBsum entry: 3azeName: Structural protein/DNA. Title: Crystal structure of human nucleosome core particle containi mutation. Structure: Histone h3.1. Chain: a, e. Synonym: ...
     4  +2 2014 sep 15pimb p browserpimB Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155 QuickGO. A fast browser for Gene Ontology terms and annotations.
     4  ~ 2014 sep 15prositePROSITE Scan < EMBL-EBI - European Bioinformatics InstitutePS_SCAN - compare a protein sequence against the signatures in PROSITE .
     4  +1 2014 sep 13platelet degranulationGO:0002576 platelet degranulation - European Bioinformatics InstituteName, platelet degranulation . Ontology, Biological Process. Definition, The regulated exocytosis of secretory granules containing preformed mediators such as ...
     4  +1 2014 sep 13vicus septica" Ficus septica " in All results < Search < EMBL-EBIDaily Rhythm of Mutualistic Pollinator Activity and Scent Emission in Ficus septica : Ecological Differentiation between Co-Occurring Pollinators and ...
     4  ~ 2014 sep 082yuzPDBsum entry: 2yuzName: Immune system. Title: Solution structure of 4th immunoglobulin domain of slow type myosin-binding protein c. Structure: Myosin-binding protein c, ...
     4  ~ 2014 sep 06major histocompatibility complexmajor histocompatibility complex (MHC)Major Histocompatibility Complex . By Jennifer McDowall. To view structure of MHC. The immune system has several ways of protecting your body against ...
     4  -1 2014 sep 02basic proteinEosinophil major basic protein (IPR002352) < InterPro < EMBL-EBIEosinophil granule major basic protein (MBP) is a low molecular weight cationic protein present in the crystalloid core of the eosinophil granule [PMID: 3410852]  ...
     4  -1 2014 sep 013d alignmentPDBe < Fold < EMBL-EBI - European Bioinformatics Institutepairwise comparison and 3D alignment of protein structures; multiple comparison and 3D alignment of protein structures; examination of a protein structure for ...
     4  ~ 2014 sep 01cocaine ec numberEC 3.1.1.84 - Cocaine esterase.Cocaine esterase with mutations t172r / g173q, bound to dtt. Source: Rhodococcus sp. Mb1 'bresler 1999'. Organism_taxid: 104109. Strain: mb1. Gene: cocaine  ...
     4  +3 2014 aug 30mascot generic domain logoPRIDE Archive - European Bioinformatics InstituteRaw MS data files were converted into Mascot generic format files (MGF) ... 20 for MS/MS and ii) time domain off (no merging of spectra of the same precursor).
     4  +4 2014 aug 14aile sitesi icin domain
     4  ~ 2014 aug 03web database vectorVectors - European Bioinformatics InstituteEMVEC Database Query ... VECTORS DATABASES . emvec ... This website uses cookies to store a small amount of information on your computer, as part of the ...
     4  ~ 2014 aug 01transforming growth factorsTransforming growth factor , beta 1 (IPR003939) < InterPro < EMBL-EBIThe transforming growth factors -beta constitute a family of multi-functional cytokines that regulate cell growth and differentiation [PMID: 8424942]. Many cells ...
     4  +4 2014 jul 30cross reference databaseDatabase cross - references | The European Nucleotide ArchiveENA provides cross - references to external data resources deemed to be important to the user. External resources include services operated by colleagues at the ...
     4  -2 2014 jul 29europe fungi databaseDatabase cross-references | The European Nucleotide ArchiveEMBL European Bioinformatics Institute. Services ... Ensembl Genomes ( Genome Database of bacteria, protists, fungi , plants and invertebrate metazoa) ...
     4  +1 2014 jul 20protein protein interaction databasesIntAct - European Bioinformatics InstituteProteins by Reactome pathway: Sends your proteins to the Reactome ... PSICQUIC is a standard way to access molecular interaction databases across which it ...
     4  +97 2014 jul 20alpha amylase inhibitorCereal seed allergen/grain softness/trypsin and alpha - amylase The seeds of cereals contain numerous serine protease and alpha - amylase inhibitors . These inhibitors can be grouped into families based on structural ...
     5  +1 2014 sep 25fingerxsZinc finger-XS domain (IPR005381) < InterPro < EMBL-EBIThis domain is a putative nucleic acid binding zinc finger and is found at the N terminus of proteins that also contain an adjacent XS domain IPR005380 and in ...
     5  -2 2014 sep 232dabPDBeView - PDB entry 2dab - European Bioinformatics InstituteChoose subsets of PDBportfolio images, Images for 2dab , - Validation, - - Percentiles, - Biological Assemblies, - - HomoDimeric Assembly, - Deposited Structure ...
     5  -2 2014 sep 201molPDBeView - PDB entry 1mol - European Bioinformatics InstituteTWO CRYSTAL STRUCTURES OF A POTENTLY SWEET PROTEIN: NATURAL MONELLIN AT 2.75 ANGSTROMS RESOLUTION AND SINGLE-CHAIN ...
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