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what are ssr markers





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 1  ~ wikipedia.org
Microsatellite - Wikipedia, the free encyclopediaMicrosatellites, also known as simple sequence repeats ( SSRs ) or short ... They are used as molecular markers in STR analysis, for kinship, population and ... ‎Microsatellite instability - ‎STR analysis - ‎Variable number tandem repeat
 2  ~ usda.gov
Simple Sequence Repeat ( SSR ) Marker Development - Agricultural Useful SSRs usually repeat the core motif 9-30 times. Some of the major core motifs that we use in the development of SSR markers for ...
 3  ~ inra.fr
Single sequence repeats - InraSimple Sequence Repeats : the markers of choice in apple breeding. Simple sequence repeats ( SSR ), also called microsatellites, are becoming the most ...
 4  ~ okstate.edu
Simple Sequence Repeat ( SSR ) Markers for Genetic Mapping of objectives of this study were to test 142 of these SSR markers to screen raspberry and blackberry parental genotypes for potential use in existing mapping ...
 5  ~ biomedcentral.com
Development of genomic SSR markers for ... - BioMed CentralLettuce (Lactuca sativa L.) is the major crop from the group of leafy vegetables. Several types of molecular markers were developed that are ...
 6  +1 oxfordjournals.org
Integration of Simple Sequence Repeat ( SSR ) Markers Into a Microsatellite or simple sequence repeat ( SSR ) markers have been successfully used for genomic mapping, DNA fingerprinting, and marker-assisted selection ...
 7  +4 nih.gov
Development and mapping of SSR markers for maize.Microsatellite or simple sequence repeat ( SSR ) markers have wide applicability for genetic analysis in crop plant improvement strategies. The objectives of this ...
 8  +5 dovepress.com
SSR markers developed for genetic mapping in flax (Linum Abstract: Simple sequence repeats (SSRs) are useful molecular markers for genetic mapping and variety identification. A set of SSR markers was developed for ...
 9  ~ solgenomics.netMicrosatellites ( SSRs ) - Sol Genomics NetworkThe purpose was to identify SSRs that might be useful a polymorphic molecular markers genetic and breeding studies in tomato. The search parameters were ...
 10  +9 fao.org
molecular markers and their applications in cereals breedingbeen generated from RAPDs and AFLPs. Simple sequence repeats ( SSR ) or microsatellite markers have been developed more recently for major crop plants  ...
 11  -3 gramene.org
Microsatellite Markers - Gramene(2002) Development and Mapping of 2240 New SSR Markers for Rice ... from 2240 new RM markers developed by the International Rice Microsatellite Initiative ...
 12  -3 springer.com
Identification and mapping of polymorphic SSR markers from To testthe utility and cross-species transferability of EST-derived SSR markers , primers were designed to the flanking regions of 41 barley SSRs and used ...
 14  +3 pioneer.com
Using Molecular Markers in Plant Genetics Research - Pioneerare tracked as molecular markers to identify desired genes and the resulting trait. .... SSR markers are one to six nucleotide repetitions of the DNA code.
 16  +2 sciencedirect.com
Application of simple sequence repeat ( SSR ) markers for molecular Six SSR markers were used for genotyping as reported earlier (Warburton et al., 2002). The sequences and length of primers as well as the ...
 17  -2 wiley.com
Development of genic‐ SSRs markers from soybean aphid Development of genic- SSRs markers from soybean aphid sequences generated by high-throughput sequencing of cDNA library. T.-H. Jun1,2, ...
 18  -8 ccmb.res.in
SSR markers - CCMBMicrosatellite or Simple sequence repeat ( SSR ) are tandem repeated nucleotide sequences ranging from one to six base pair long that vary in ...
 19  +4 ajol.info
( SSRs ) markers to study the resistance of locally adapted maize Application of simple sequence repeats ( SSRs ) markers ... conventional methods were screened using 52 SSR markers contained between Bin ...
 20  ~ plosone.org
Floral Transcriptome Sequencing for SSR Marker Development and From these SSR-containing sequences, 2,439 candidate SSR markers were developed and 720 were experimentally tested, validating 431 ...
 21  -7 icrisat.org
Novel SSR markers from BAC-End sequences, DArTarrays ... - icrisatNovel SSR markers from BAC-End sequences, DArTarrays and a comprehensive geneticmap with 1,291 marker loci for chickpea (Cicerarietinum L.) Thudi M1 ...
 23  +4 doi.org
Characterization of novel genic SSR markers in Linum usitatissimum Little is known about the evolutionary relationships among Linum species, basically because of the lack of transferable molecular markers . Currently, expressed ...
 24  ~ amseed.orgASTA Table 2 | SSR Markers Utilized in the ASTA StudySSR markers utilized in the ASTA study and commonality with SSRs selected by the French organization SEPROMA (La Chambre Syndicale des. Entreprises de  ...
 25  +14 researchgate.net
How to design primers for EST- SSR Markers ? - ResearchGateIf you are well versed with pirl script use MISA TOOL to locate ssrs in the ... What in the EST Database your are mining for SST markers and ...
 26  +74 bioversityinternational.org
Massive sorghum collection genotyped with SSR markers to We present here a large diversity survey in sorghum with 3367 accessions and 41 reference nuclear SSR markers . Of 19 alleles on average per locus, the ...
 27  +30 cropj.com
Comparison of the effectiveness of ISSR and SSR markers in Genetic distances showed groups of cultivars with a common maturity period and a common fruit consistency. SSR markers discriminate the fruit characteristics ...
 28  +72 genebase.com
What is a Short Tandem Repeat (STR)? - Learning Center A short tandem repeat (STR) is a type of DNA polymorphism where short ... Which markers are tested in the Y-DNA SNP Haplogroup Backbone Panel?
 29  -7 mdpi.com
Molecules | Free Full-Text | Use of EST- SSR Markers for Evaluating In this study we made use of simple sequence repeat ( SSR ) markers generated from previous celery transcriptome sequencing and attempted ...
 30  ~ dnalandmarks.caSSR /STR - DNA LandmarksSimple Sequence Repeats ( SSR ), Simple Tandem Repeats (STRs) or Microsatellites. SSR /STR markers , also known as microsatellites, usually consist of di or ...
 31  +70 hindawi.com
Association Analysis of SSR Markers with Phenology, Grain, and A total of 159 SSR alleles were detected across 34 selected single-copy SSR loci . SSR marker data revealed presence of subpopulations.
 32  -7 cgiar.org
SSR Marker - IPD - CIP-collabIdentify your potato with DNA markers A molecular Khipu based on the individual profiles of alleles against the overall allele frequencies in a collection of ...
 33  -12 bepress.com
"Application of SSR markers in the construction of Australian barley Simple sequence repeat ( SSR ) or microsatellite markers were examined for polymorphisms among the parents of 12 barley mapping populations. Of 259 SSRs  ...
 34  +22 rutgers.edu
genetic diversity of creeping bentgrass cultivars using ssr markerswere to: 1) characterize 30 SSR markers in creeping bentgrass, 2) determine genetic ... Thirty SSRs markers were isolated from a genomic library of creeping ...
 36  +22 wur.nl
Reproducibility testing of RAPD, AFLP and SSR markers in plants by Molecular Breeding 3: 381–390, 1997. 381 c 1997 Kluwer Academic Publishers. Printed in Belgium. Reproducibility testing of RAPD, AFLP and SSR markers in ...
 37  +41 pomics.com
Development and characterization of EST based SSR markers in Simple sequence repeat ( SSR ) markers derived from expressed sequence tags ... are to develop EST based SSR markers , their polymorphism in Catharanthus.
 38  -14 psu.edu
Molecular characterization of rice land races using SSR markersgenetic divergence of 12 rice land races using five SSR markers . A total of 11 alleles were detected in 12 land races and the number of alleles per locus ranged ...
 39  +61 omicsonline.org
Morphological, Molecular Identification and SSR Marker Analysis of (2013) Morphological, Molecular Identification and SSR Marker Analysis of a Potential Strain of Trichoderma/Hypocrea for Production of a Bioformulation. J Plant ...
 40  -6 ncsu.edu
Development and Characterization of Microsatellite Markers ( SSR Cucurbit Genetics Cooperative Report 27:61-65 (2004). 61. Development and Characterization of Microsatellite Markers ( SSR ) in. Cucurbita Species. G. Stift, A.
 41  ~ integratedbreeding.netCowpea SSR Markers | Integrated Breeding Platform2010 developed 410 EST derived SSR (eSSR) markers and 600 SSR markers derived from cowpea genespace sequences (GSS) with a cross-subspecies ...
 42  -4 springerprotocols.com
SpringerProtocols: Abstract: Robust and Inexpensive SSR Markers SSR markers are quite popular markers because they are easily implementable in standard laboratories, can be used on manual gel electrophoresis, require ...
 43  +58 academia.edu
Utilization of SSR Markers for Seed Purity Testing in Popular Rice In this study 35 simple sequence repeats ( SSR ) markers were employed for fingerprinting 2 popular rice hybrids and their parental lines. Six SSR markers were ...
 44  -1 cotton.org
SSR Marker (s) Associated with Root Knot Nematode Resistance SSR Marker (s) Associated with Root Knot Nematode Resistance Gene(s) in Cotton. Chethana Bezawada, Sukumar Saha*, Johnie N. Jenkins, Roy G. Creech , ...
 45  ~ cottonmarker.orgSSR Projects - Cotton Marker DatabaseProjects Data from several cotton microsatellite marker projects ...
 46  -14 cambridge.org
Comparison of genomic and EST-derived SSR markers in SSR markers in phylogenetic analysis of wheat. Agata Gadaleta*, Angelica Giancaspro, Silvana Zacheo, Domenica Nigro,. Stefania Lucia Giove, Pasqualina  ...
 47  -2 google.com
Application of Microsatellite/ SSR Markers for the Identification ... - Google Books ResultXiaoyu Liu - ‎2009 - 166 pages SSR Scoring: SSR primers amplifying the same DNA band patterns among rootstock genotypes were scored as monomorphic markers . SSR primers amplifying ...
 48  -20 bioone.org
Development and Characterization of 25 EST- SSR markers in Pinus Conclusions: These new polymorphic EST- SSR markers will be useful for assessing genetic diversity, molecular breeding and genetic ...
 49  ~ auxinevodevo.orgIntroduction to Molecular Markers and their ... - Auxin Evo Devosimultaneous scoring of many markers . Detection of SNPs can be done without gels. • SSR -a site in the genome that contains many short tandem repeat  ...
 50  +20 srce.hr
Cross-species amplification of eucalyptus SSR markers in cost-effective approach for developing microsatellite markers for new species. We exam- ined the transferability of eucalyptus SSR loci to the economically ...
 51  +49 yahoo.com
What are ssr markers ? - Yahoo AnswersIn 1989, Weber & May and Litt & Luty discover microsatellite sequences, demonstrate their high level of polymorphism due to variations in the number of tandem ...
 52  -12 nature.com
Leukemia - Short tandem repeat markers in diagnostics: what's in a Short tandem repeat markers in diagnostics: what's in a repeat? M G J Tilanus1 on behalf of the Eurochimerism Consortium2. 1Department of Pathology, ...
 53  +1 ashspublications.org
Use of SSR Markers to Assess Identity, Pedigree, and Diversity of Abstract. The North American muscadine grape (Muscadinia rotundifolia Small) is a valuable source of resistance to powdery mildew [Uncinula necator (Schw.) ...